Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn5aQ9JJV9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scn5aQ9JJV9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn5aQ9JJV9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn5aQ9JJV9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scn5aQ9JJV9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Scn5aQ9JJV9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Scn5aQ9JJV9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn5aQ9JJV9 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.44■□□□□ 0.22
Scn5aQ9JJV9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn5aQ9JJV9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn5aQ9JJV9 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.44■□□□□ 0.22
Scn5aQ9JJV9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn5aQ9JJV9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Scn5aQ9JJV9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Gm27301-201ENSMUST00000184012 127 ntBASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Gm17271-201ENSMUST00000165535 355 ntBASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Gm44872-201ENSMUST00000207864 420 ntBASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn5aQ9JJV9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.42■□□□□ 0.22
Scn5aQ9JJV9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Gm19164-201ENSMUST00000210667 640 ntBASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Mir6990-201ENSMUST00000183724 91 ntBASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn5aQ9JJV9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Scn5aQ9JJV9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms