Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.55■□□□□ 0.4
Copb1Q9JIF7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.55■□□□□ 0.4
Copb1Q9JIF7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Copb1Q9JIF7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Copb1Q9JIF7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Mir7071-201ENSMUST00000184847 69 ntBASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Copb1Q9JIF7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Copb1Q9JIF7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Copb1Q9JIF7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Copb1Q9JIF7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Copb1Q9JIF7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Copb1Q9JIF7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Copb1Q9JIF7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Gm21559-201ENSMUST00000220638 855 ntBASIC17.51■□□□□ 0.39
Copb1Q9JIF7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Gm8587-201ENSMUST00000076538 843 ntBASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Copb1Q9JIF7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms