Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Gm26524-201ENSMUST00000192339 390 ntBASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 AV356131-201ENSMUST00000206201 750 ntBASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Rab3c-203ENSMUST00000224180 967 ntBASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rhox4bQ9JI43 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rhox4bQ9JI43 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rhox4bQ9JI43 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.96□□□□□ -0.33
Rhox4bQ9JI43 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rhox4bQ9JI43 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.96□□□□□ -0.33
Rhox4bQ9JI43 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rhox4bQ9JI43 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rhox4bQ9JI43 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rhox4bQ9JI43 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rhox4bQ9JI43 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rhox4bQ9JI43 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.96□□□□□ -0.33
Rhox4bQ9JI43 Gm42642-201ENSMUST00000200683 355 ntBASIC12.96□□□□□ -0.33
Rhox4bQ9JI43 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rhox4bQ9JI43 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rhox4bQ9JI43 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rhox4bQ9JI43 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rhox4bQ9JI43 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rhox4bQ9JI43 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rhox4bQ9JI43 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rhox4bQ9JI43 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rhox4bQ9JI43 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms