Protein–RNA interactions for Protein: Q9ESX4

Zcchc17, Nucleolar protein of 40 kDa, mousemouse

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc17Q9ESX4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc17Q9ESX4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.8■□□□□ 0.6
Zcchc17Q9ESX4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc17Q9ESX4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.8■□□□□ 0.6
Zcchc17Q9ESX4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.8■□□□□ 0.6
Zcchc17Q9ESX4 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.8■□□□□ 0.6
Zcchc17Q9ESX4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc17Q9ESX4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.8■□□□□ 0.6
Zcchc17Q9ESX4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Zcchc17Q9ESX4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc17Q9ESX4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc17Q9ESX4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc17Q9ESX4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc17Q9ESX4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc17Q9ESX4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc17Q9ESX4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Gm14701-201ENSMUST00000117156 348 ntBASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc17Q9ESX4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Zcchc17Q9ESX4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Zcchc17Q9ESX4 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.77■□□□□ 0.6
Zcchc17Q9ESX4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zcchc17Q9ESX4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zcchc17Q9ESX4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zcchc17Q9ESX4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.77■□□□□ 0.6
Zcchc17Q9ESX4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zcchc17Q9ESX4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Zcchc17Q9ESX4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.77■□□□□ 0.6
Zcchc17Q9ESX4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Zcchc17Q9ESX4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Zcchc17Q9ESX4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Zcchc17Q9ESX4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Zcchc17Q9ESX4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Gm37153-201ENSMUST00000193637 231 ntBASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc17Q9ESX4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms