Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rtn3Q9ES97 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.06■□□□□ 0.32
Rtn3Q9ES97 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.06■□□□□ 0.32
Rtn3Q9ES97 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn3Q9ES97 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn3Q9ES97 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn3Q9ES97 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn3Q9ES97 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn3Q9ES97 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rtn3Q9ES97 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn3Q9ES97 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.06■□□□□ 0.32
Rtn3Q9ES97 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rtn3Q9ES97 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn3Q9ES97 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn3Q9ES97 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.06■□□□□ 0.32
Rtn3Q9ES97 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn3Q9ES97 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn3Q9ES97 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn3Q9ES97 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Gm27742-201ENSMUST00000184667 60 ntBASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Gm29707-201ENSMUST00000196325 491 ntBASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Gm18669-201ENSMUST00000216049 778 ntBASIC17.03■□□□□ 0.32
Rtn3Q9ES97 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rtn3Q9ES97 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms