Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Ush1cQ9ES64 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ush1cQ9ES64 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.39■□□□□ 0.53
Ush1cQ9ES64 Gm4974-201ENSMUST00000209974 875 ntBASIC18.39■□□□□ 0.53
Ush1cQ9ES64 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ush1cQ9ES64 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ush1cQ9ES64 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ush1cQ9ES64 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ush1cQ9ES64 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ush1cQ9ES64 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ush1cQ9ES64 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ush1cQ9ES64 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ush1cQ9ES64 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ush1cQ9ES64 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ush1cQ9ES64 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ush1cQ9ES64 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Gm45760-201ENSMUST00000212190 1782 ntBASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.38■□□□□ 0.53
Ush1cQ9ES64 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.37■□□□□ 0.53
Ush1cQ9ES64 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Ush1cQ9ES64 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ush1cQ9ES64 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.35■□□□□ 0.53
Ush1cQ9ES64 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ush1cQ9ES64 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ush1cQ9ES64 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ush1cQ9ES64 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ush1cQ9ES64 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.35■□□□□ 0.53
Ush1cQ9ES64 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.35■□□□□ 0.53
Ush1cQ9ES64 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ush1cQ9ES64 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms