Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ube3bQ9ES34 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3bQ9ES34 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3bQ9ES34 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3bQ9ES34 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.99■□□□□ 0.63
Ube3bQ9ES34 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.99■□□□□ 0.63
Ube3bQ9ES34 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3bQ9ES34 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3bQ9ES34 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3bQ9ES34 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3bQ9ES34 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3bQ9ES34 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3bQ9ES34 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3bQ9ES34 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3bQ9ES34 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ube3bQ9ES34 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ube3bQ9ES34 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3bQ9ES34 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ube3bQ9ES34 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Gm12350-201ENSMUST00000121208 462 ntBASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Gm27646-201ENSMUST00000183989 110 ntBASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube3bQ9ES34 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Gm8344-201ENSMUST00000119813 856 ntBASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Gm15173-201ENSMUST00000122049 433 ntBASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms