Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vps35Q9EQH3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Vps35Q9EQH3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps35Q9EQH3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Vps35Q9EQH3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps35Q9EQH3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps35Q9EQH3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vps35Q9EQH3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Vps35Q9EQH3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Ank2-226ENSMUST00000189368 339 ntBASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps35Q9EQH3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps35Q9EQH3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.02■□□□□ 0.16
Vps35Q9EQH3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps35Q9EQH3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vps35Q9EQH3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps35Q9EQH3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps35Q9EQH3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps35Q9EQH3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Vps35Q9EQH3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.02■□□□□ 0.16
Vps35Q9EQH3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.02■□□□□ 0.16
Vps35Q9EQH3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps35Q9EQH3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.02■□□□□ 0.16
Vps35Q9EQH3 Gm17807-201ENSMUST00000186869 298 ntBASIC16.02■□□□□ 0.16
Vps35Q9EQH3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps35Q9EQH3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps35Q9EQH3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.02■□□□□ 0.16
Vps35Q9EQH3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps35Q9EQH3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps35Q9EQH3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.02■□□□□ 0.15
Vps35Q9EQH3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vps35Q9EQH3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps35Q9EQH3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vps35Q9EQH3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps35Q9EQH3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps35Q9EQH3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps35Q9EQH3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.02■□□□□ 0.15
Vps35Q9EQH3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps35Q9EQH3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vps35Q9EQH3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps35Q9EQH3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Gm13312-201ENSMUST00000119631 718 ntBASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Mir3081-201ENSMUST00000175305 84 ntBASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps35Q9EQH3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Vps35Q9EQH3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Vps35Q9EQH3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Vps35Q9EQH3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms