Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a3bpQ9EQG9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a3bpQ9EQG9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a3bpQ9EQG9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a3bpQ9EQG9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a3bpQ9EQG9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a3bpQ9EQG9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a3bpQ9EQG9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.35■□□□□ 0.53
Col4a3bpQ9EQG9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.35■□□□□ 0.53
Col4a3bpQ9EQG9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.35■□□□□ 0.53
Col4a3bpQ9EQG9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a3bpQ9EQG9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a3bpQ9EQG9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a3bpQ9EQG9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a3bpQ9EQG9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a3bpQ9EQG9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 App-207ENSMUST00000227737 2827 ntBASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a3bpQ9EQG9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a3bpQ9EQG9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a3bpQ9EQG9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a3bpQ9EQG9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a3bpQ9EQG9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a3bpQ9EQG9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a3bpQ9EQG9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a3bpQ9EQG9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a3bpQ9EQG9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a3bpQ9EQG9 Ank2-226ENSMUST00000189368 339 ntBASIC18.33■□□□□ 0.52
Col4a3bpQ9EQG9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.33■□□□□ 0.52
Col4a3bpQ9EQG9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a3bpQ9EQG9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Col4a3bpQ9EQG9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms