Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upf1Q9EPU0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Upf1Q9EPU0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upf1Q9EPU0 Grk6-206ENSMUST00000224995 2971 ntBASIC18.09■□□□□ 0.49
Upf1Q9EPU0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upf1Q9EPU0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upf1Q9EPU0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upf1Q9EPU0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Upf1Q9EPU0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Upf1Q9EPU0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Upf1Q9EPU0 Gm31326-201ENSMUST00000191856 1048 ntBASIC18.09■□□□□ 0.49
Upf1Q9EPU0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upf1Q9EPU0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.09■□□□□ 0.49
Upf1Q9EPU0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upf1Q9EPU0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upf1Q9EPU0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Upf1Q9EPU0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upf1Q9EPU0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upf1Q9EPU0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upf1Q9EPU0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Upf1Q9EPU0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
Upf1Q9EPU0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Upf1Q9EPU0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Upf1Q9EPU0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.08■□□□□ 0.49
Upf1Q9EPU0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Upf1Q9EPU0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.08■□□□□ 0.48
Upf1Q9EPU0 Gm19164-201ENSMUST00000210667 640 ntBASIC18.08■□□□□ 0.48
Upf1Q9EPU0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.08■□□□□ 0.48
Upf1Q9EPU0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Upf1Q9EPU0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Upf1Q9EPU0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upf1Q9EPU0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Upf1Q9EPU0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Upf1Q9EPU0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upf1Q9EPU0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upf1Q9EPU0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upf1Q9EPU0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upf1Q9EPU0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Upf1Q9EPU0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Gm11425-201ENSMUST00000119608 498 ntBASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Gm38225-201ENSMUST00000194001 393 ntBASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Gm9396-201ENSMUST00000076703 567 ntBASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upf1Q9EPU0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Gm18827-201ENSMUST00000188341 790 ntBASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Gm29541-201ENSMUST00000191351 678 ntBASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Gm45841-201ENSMUST00000207700 164 ntBASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 AC166349.1-201ENSMUST00000220866 695 ntBASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Gm10154-201ENSMUST00000084445 354 ntBASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.06■□□□□ 0.48
Upf1Q9EPU0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upf1Q9EPU0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upf1Q9EPU0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Upf1Q9EPU0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Upf1Q9EPU0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upf1Q9EPU0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Upf1Q9EPU0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upf1Q9EPU0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms