Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cdc40Q9DC48 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdc40Q9DC48 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdc40Q9DC48 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdc40Q9DC48 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdc40Q9DC48 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdc40Q9DC48 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdc40Q9DC48 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdc40Q9DC48 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Cdc40Q9DC48 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdc40Q9DC48 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdc40Q9DC48 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdc40Q9DC48 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 Gm43347-201ENSMUST00000200226 580 ntBASIC14.85□□□□□ -0.03
Cdc40Q9DC48 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdc40Q9DC48 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.84□□□□□ -0.03
Cdc40Q9DC48 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Gm12895-201ENSMUST00000122214 226 ntBASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Gm28659-201ENSMUST00000188013 759 ntBASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Gm34391-201ENSMUST00000203706 907 ntBASIC14.84□□□□□ -0.03
Cdc40Q9DC48 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdc40Q9DC48 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdc40Q9DC48 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Cdc40Q9DC48 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdc40Q9DC48 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.83□□□□□ -0.03
Cdc40Q9DC48 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdc40Q9DC48 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdc40Q9DC48 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdc40Q9DC48 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdc40Q9DC48 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdc40Q9DC48 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Gm5864-201ENSMUST00000202263 970 ntBASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Gm44771-201ENSMUST00000206975 626 ntBASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdc40Q9DC48 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms