Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssmem1Q9D9Y8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Gm27459-201ENSMUST00000184860 107 ntBASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssmem1Q9D9Y8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Gm25406-201ENSMUST00000157599 105 ntBASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssmem1Q9D9Y8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Gm25745-201ENSMUST00000174945 133 ntBASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ssmem1Q9D9Y8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms