Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hcfc2Q9D968 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hcfc2Q9D968 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hcfc2Q9D968 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcfc2Q9D968 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcfc2Q9D968 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.18□□□□□ -0.46
Hcfc2Q9D968 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Il3ra-202ENSMUST00000223589 738 ntBASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.18□□□□□ -0.46
Hcfc2Q9D968 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc2Q9D968 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc2Q9D968 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Hcfc2Q9D968 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc2Q9D968 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hcfc2Q9D968 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hcfc2Q9D968 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcfc2Q9D968 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms