Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 Gm11336-201ENSMUST00000118168 334 ntBASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 Gm8520-201ENSMUST00000186517 868 ntBASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp5Q9D7S9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 Gm15039-201ENSMUST00000118914 875 ntBASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp5Q9D7S9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Gm27528-202ENSMUST00000222916 2012 ntBASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Gm29257-201ENSMUST00000186115 639 ntBASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Gm10566-201ENSMUST00000086739 996 ntBASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp5Q9D7S9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp5Q9D7S9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp5Q9D7S9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp5Q9D7S9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp5Q9D7S9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp5Q9D7S9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp5Q9D7S9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp5Q9D7S9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp5Q9D7S9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp5Q9D7S9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp5Q9D7S9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp5Q9D7S9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
Chmp5Q9D7S9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Chmp5Q9D7S9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Chmp5Q9D7S9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms