Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 Mir6404-201ENSMUST00000183699 94 ntBASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 Gm42474-201ENSMUST00000201073 505 ntBASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 Gm25131-201ENSMUST00000082653 151 ntBASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.85■□□□□ 0.29
Rnf225Q9D7D1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf225Q9D7D1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rnf225Q9D7D1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rnf225Q9D7D1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf225Q9D7D1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 AC173345.3-201ENSMUST00000221245 1093 ntBASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf225Q9D7D1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rnf225Q9D7D1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf225Q9D7D1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf225Q9D7D1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf225Q9D7D1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf225Q9D7D1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.81■□□□□ 0.28
Rnf225Q9D7D1 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf225Q9D7D1 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rnf225Q9D7D1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf225Q9D7D1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf225Q9D7D1 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf225Q9D7D1 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rnf225Q9D7D1 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rnf225Q9D7D1 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rnf225Q9D7D1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms