Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a3Q9D554 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.32■□□□□ 0.2
Sf3a3Q9D554 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a3Q9D554 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a3Q9D554 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a3Q9D554 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a3Q9D554 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a3Q9D554 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a3Q9D554 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a3Q9D554 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.32■□□□□ 0.2
Sf3a3Q9D554 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a3Q9D554 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Gm7290-201ENSMUST00000104990 617 ntBASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Gm12918-201ENSMUST00000120234 636 ntBASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Gm15710-201ENSMUST00000121821 636 ntBASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Gm5075-201ENSMUST00000196916 622 ntBASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a3Q9D554 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Gm10517-202ENSMUST00000192970 758 ntBASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Sf3a3Q9D554 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Gm24841-201ENSMUST00000158676 357 ntBASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.29■□□□□ 0.2
Sf3a3Q9D554 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a3Q9D554 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sf3a3Q9D554 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a3Q9D554 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a3Q9D554 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a3Q9D554 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a3Q9D554 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a3Q9D554 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms