Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Snx29Q9D3S3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.53■□□□□ 0.4
Snx29Q9D3S3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx29Q9D3S3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.53■□□□□ 0.4
Snx29Q9D3S3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Snx29Q9D3S3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx29Q9D3S3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Snx29Q9D3S3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.53■□□□□ 0.4
Snx29Q9D3S3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx29Q9D3S3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Snx29Q9D3S3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.53■□□□□ 0.4
Snx29Q9D3S3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.53■□□□□ 0.4
Snx29Q9D3S3 Gm9682-201ENSMUST00000197505 556 ntBASIC17.53■□□□□ 0.4
Snx29Q9D3S3 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.53■□□□□ 0.4
Snx29Q9D3S3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Snx29Q9D3S3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Snx29Q9D3S3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx29Q9D3S3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx29Q9D3S3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx29Q9D3S3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx29Q9D3S3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx29Q9D3S3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Snx29Q9D3S3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx29Q9D3S3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx29Q9D3S3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx29Q9D3S3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Gm17271-201ENSMUST00000165535 355 ntBASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Snx29Q9D3S3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx29Q9D3S3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx29Q9D3S3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx29Q9D3S3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx29Q9D3S3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Snx29Q9D3S3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms