Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Gm10698-201ENSMUST00000182663 604 ntBASIC14.83□□□□□ -0.04
Trim13Q9CYB0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim13Q9CYB0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim13Q9CYB0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Actl10-202ENSMUST00000226583 1501 ntBASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim13Q9CYB0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Gm7791-201ENSMUST00000219066 539 ntBASIC14.8□□□□□ -0.04
Trim13Q9CYB0 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms