Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssr1Q9CY50 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssr1Q9CY50 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Gm18115-201ENSMUST00000221209 621 ntBASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Gm10566-201ENSMUST00000086739 996 ntBASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Sybu-209ENSMUST00000228639 4113 ntBASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssr1Q9CY50 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ssr1Q9CY50 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 CT025610.1-201ENSMUST00000224552 1786 ntBASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssr1Q9CY50 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms