Protein–RNA interactions for Protein: Q9CXS0

3110018I06Rik, RIKEN cDNA 3110018I06 gene, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3110018I06RikQ9CXS0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
3110018I06RikQ9CXS0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
3110018I06RikQ9CXS0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
3110018I06RikQ9CXS0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
3110018I06RikQ9CXS0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
3110018I06RikQ9CXS0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
3110018I06RikQ9CXS0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
3110018I06RikQ9CXS0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
3110018I06RikQ9CXS0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Gm27704-201ENSMUST00000185094 107 ntBASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Gm7367-201ENSMUST00000057611 492 ntBASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
3110018I06RikQ9CXS0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
3110018I06RikQ9CXS0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
3110018I06RikQ9CXS0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.27□□□□□ -0.44
3110018I06RikQ9CXS0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
3110018I06RikQ9CXS0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
3110018I06RikQ9CXS0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
3110018I06RikQ9CXS0 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
3110018I06RikQ9CXS0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
3110018I06RikQ9CXS0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
3110018I06RikQ9CXS0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
3110018I06RikQ9CXS0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
3110018I06RikQ9CXS0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms