Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Chd1lQ9CXF7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.14■□□□□ 0.5
Chd1lQ9CXF7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chd1lQ9CXF7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chd1lQ9CXF7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1lQ9CXF7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1lQ9CXF7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Chd1lQ9CXF7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.14■□□□□ 0.49
Chd1lQ9CXF7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1lQ9CXF7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1lQ9CXF7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.14■□□□□ 0.49
Chd1lQ9CXF7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1lQ9CXF7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Chd1lQ9CXF7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Chd1lQ9CXF7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1lQ9CXF7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1lQ9CXF7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1lQ9CXF7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1lQ9CXF7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd1lQ9CXF7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Gm36967-201ENSMUST00000193814 266 ntBASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd1lQ9CXF7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Gm10698-201ENSMUST00000182663 604 ntBASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd1lQ9CXF7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1lQ9CXF7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1lQ9CXF7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms