Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx47Q9CWX9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx47Q9CWX9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx47Q9CWX9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx47Q9CWX9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx47Q9CWX9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx47Q9CWX9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx47Q9CWX9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx47Q9CWX9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx47Q9CWX9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx47Q9CWX9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx47Q9CWX9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx47Q9CWX9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx47Q9CWX9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Gm13186-201ENSMUST00000118031 316 ntBASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Gm38027-201ENSMUST00000192315 235 ntBASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx47Q9CWX9 Phf7-203ENSMUST00000226565 1971 ntBASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ddx47Q9CWX9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms