Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm7Q9CQQ8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Gm2651-201ENSMUST00000203560 838 ntBASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Gm10060-201ENSMUST00000212002 111 ntBASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm7Q9CQQ8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Gm13418-201ENSMUST00000119097 944 ntBASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm7Q9CQQ8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Gm25990-201ENSMUST00000102440 86 ntBASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Gm6443-201ENSMUST00000203599 874 ntBASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms