Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RTRAFQ9CQE8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RTRAFQ9CQE8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RTRAFQ9CQE8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
RTRAFQ9CQE8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.31
RTRAFQ9CQE8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RTRAFQ9CQE8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
RTRAFQ9CQE8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Gm42642-201ENSMUST00000200683 355 ntBASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RTRAFQ9CQE8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RTRAFQ9CQE8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 AV356131-201ENSMUST00000206201 750 ntBASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RTRAFQ9CQE8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms