Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim11Q99PQ2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim11Q99PQ2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Gm5587-201ENSMUST00000206270 674 ntBASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim11Q99PQ2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 Gm6623-201ENSMUST00000173570 544 ntBASIC18.24■□□□□ 0.51
Trim11Q99PQ2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trim11Q99PQ2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim11Q99PQ2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim11Q99PQ2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim11Q99PQ2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim11Q99PQ2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim11Q99PQ2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim11Q99PQ2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.22■□□□□ 0.51
Trim11Q99PQ2 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.22■□□□□ 0.51
Trim11Q99PQ2 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.22■□□□□ 0.51
Trim11Q99PQ2 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.22■□□□□ 0.51
Trim11Q99PQ2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim11Q99PQ2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim11Q99PQ2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim11Q99PQ2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim11Q99PQ2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim11Q99PQ2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim11Q99PQ2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim11Q99PQ2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms