Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pcdh15Q99PJ1 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.02■□□□□ 0.48
Pcdh15Q99PJ1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh15Q99PJ1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh15Q99PJ1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh15Q99PJ1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh15Q99PJ1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh15Q99PJ1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh15Q99PJ1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh15Q99PJ1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh15Q99PJ1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.02■□□□□ 0.47
Pcdh15Q99PJ1 Gm24158-201ENSMUST00000175263 71 ntBASIC18.02■□□□□ 0.47
Pcdh15Q99PJ1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh15Q99PJ1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.02■□□□□ 0.47
Pcdh15Q99PJ1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.02■□□□□ 0.47
Pcdh15Q99PJ1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Gm17837-201ENSMUST00000186435 985 ntBASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdh15Q99PJ1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Fam105a-203ENSMUST00000226170 3043 ntBASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Gm6973-201ENSMUST00000117080 721 ntBASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh15Q99PJ1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Gm2810-201ENSMUST00000118681 990 ntBASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh15Q99PJ1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.98■□□□□ 0.47
Pcdh15Q99PJ1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdh15Q99PJ1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh15Q99PJ1 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.98■□□□□ 0.47
Pcdh15Q99PJ1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdh15Q99PJ1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh15Q99PJ1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh15Q99PJ1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh15Q99PJ1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh15Q99PJ1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh15Q99PJ1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh15Q99PJ1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh15Q99PJ1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh15Q99PJ1 Gm6415-201ENSMUST00000118488 348 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms