Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm25990-201ENSMUST00000102440 86 ntBASIC14.02□□□□□ -0.17
Scrt1Q99M85 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Gm24513-201ENSMUST00000174964 138 ntBASIC14.02□□□□□ -0.17
Scrt1Q99M85 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Scrt1Q99M85 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Gm2756-201ENSMUST00000195851 400 ntBASIC14.01□□□□□ -0.17
Scrt1Q99M85 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scrt1Q99M85 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.01□□□□□ -0.17
Scrt1Q99M85 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14□□□□□ -0.17
Scrt1Q99M85 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Scrt1Q99M85 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14□□□□□ -0.17
Scrt1Q99M85 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14□□□□□ -0.17
Scrt1Q99M85 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Scrt1Q99M85 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14□□□□□ -0.17
Scrt1Q99M85 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14□□□□□ -0.17
Scrt1Q99M85 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14□□□□□ -0.17
Scrt1Q99M85 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14□□□□□ -0.17
Scrt1Q99M85 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14□□□□□ -0.17
Scrt1Q99M85 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14□□□□□ -0.17
Scrt1Q99M85 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14□□□□□ -0.17
Scrt1Q99M85 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14□□□□□ -0.17
Scrt1Q99M85 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Scrt1Q99M85 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14□□□□□ -0.17
Scrt1Q99M85 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Scrt1Q99M85 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Zfp264-201ENSMUST00000208656 1563 ntBASIC14□□□□□ -0.17
Scrt1Q99M85 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scrt1Q99M85 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Scrt1Q99M85 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms