Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm18421-201ENSMUST00000204122 625 ntBASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Mir1199-201ENSMUST00000117015 119 ntBASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd1Q99J36 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Gm27463-201ENSMUST00000183569 57 ntBASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Gm29707-201ENSMUST00000196325 491 ntBASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.28□□□□□ -0.12
Thumpd1Q99J36 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd1Q99J36 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd1Q99J36 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd1Q99J36 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Thumpd1Q99J36 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd1Q99J36 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd1Q99J36 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd1Q99J36 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd1Q99J36 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd1Q99J36 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd1Q99J36 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.27□□□□□ -0.12
Thumpd1Q99J36 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Thumpd1Q99J36 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd1Q99J36 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.27□□□□□ -0.12
Thumpd1Q99J36 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.27□□□□□ -0.13
Thumpd1Q99J36 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.27□□□□□ -0.13
Thumpd1Q99J36 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.27□□□□□ -0.13
Thumpd1Q99J36 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Thumpd1Q99J36 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Thumpd1Q99J36 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd1Q99J36 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Thumpd1Q99J36 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd1Q99J36 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd1Q99J36 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd1Q99J36 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd1Q99J36 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd1Q99J36 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Thumpd1Q99J36 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms