Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Gm5264-201ENSMUST00000190584 848 ntBASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Gm9172-201ENSMUST00000212092 954 ntBASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb18Q91Y02 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb18Q91Y02 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Pcdhb18Q91Y02 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb18Q91Y02 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Gm6089-201ENSMUST00000197666 938 ntBASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb18Q91Y02 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Gm11779-201ENSMUST00000118541 368 ntBASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Gm6550-201ENSMUST00000187574 993 ntBASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 AV026068-213ENSMUST00000223675 1171 ntBASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb18Q91Y02 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb18Q91Y02 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb18Q91Y02 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb18Q91Y02 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb18Q91Y02 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb18Q91Y02 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb18Q91Y02 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb18Q91Y02 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb18Q91Y02 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb18Q91Y02 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb18Q91Y02 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb18Q91Y02 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb18Q91Y02 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Pcdhb18Q91Y02 Gm15467-201ENSMUST00000120582 445 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms