Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb6Q91XZ4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Mir3081-201ENSMUST00000175305 84 ntBASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Gm33142-201ENSMUST00000193913 867 ntBASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb6Q91XZ4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb6Q91XZ4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb6Q91XZ4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms