Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Gm44771-201ENSMUST00000206975 626 ntBASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Mzt1-203ENSMUST00000227948 952 ntBASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Gm12895-201ENSMUST00000122214 226 ntBASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Rprl3-201ENSMUST00000157400 290 ntBASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Gm28659-201ENSMUST00000188013 759 ntBASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.81■□□□□ 0.12
Pcdhga9Q91XX9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga9Q91XX9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.79■□□□□ 0.12
Pcdhga9Q91XX9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms