Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trex1Q91XB0 Gm45167-201ENSMUST00000208007 322 ntBASIC18.3■□□□□ 0.52
Trex1Q91XB0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trex1Q91XB0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trex1Q91XB0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trex1Q91XB0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trex1Q91XB0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trex1Q91XB0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.3■□□□□ 0.52
Trex1Q91XB0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trex1Q91XB0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trex1Q91XB0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.29■□□□□ 0.52
Trex1Q91XB0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Gm2756-201ENSMUST00000195851 400 ntBASIC18.29■□□□□ 0.52
Trex1Q91XB0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Gm10175-201ENSMUST00000086013 645 ntBASIC18.29■□□□□ 0.52
Trex1Q91XB0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trex1Q91XB0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trex1Q91XB0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Gm23935-201ENSMUST00000102303 57 ntBASIC18.28■□□□□ 0.52
Trex1Q91XB0 Gm24270-201ENSMUST00000102326 57 ntBASIC18.28■□□□□ 0.52
Trex1Q91XB0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Gm14822-201ENSMUST00000122247 291 ntBASIC18.28■□□□□ 0.52
Trex1Q91XB0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Gm24245-201ENSMUST00000157318 57 ntBASIC18.28■□□□□ 0.52
Trex1Q91XB0 Gm25911-201ENSMUST00000157621 56 ntBASIC18.28■□□□□ 0.52
Trex1Q91XB0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Gm27397-201ENSMUST00000184997 107 ntBASIC18.28■□□□□ 0.52
Trex1Q91XB0 Gm37153-201ENSMUST00000193637 231 ntBASIC18.28■□□□□ 0.52
Trex1Q91XB0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trex1Q91XB0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Gm15358-201ENSMUST00000119249 520 ntBASIC18.27■□□□□ 0.52
Trex1Q91XB0 Gm24513-201ENSMUST00000174964 138 ntBASIC18.27■□□□□ 0.52
Trex1Q91XB0 Gm4899-201ENSMUST00000178708 719 ntBASIC18.27■□□□□ 0.52
Trex1Q91XB0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trex1Q91XB0 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.27■□□□□ 0.52
Trex1Q91XB0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trex1Q91XB0 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.27■□□□□ 0.51
Trex1Q91XB0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trex1Q91XB0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms