Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb17Q91VD8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Gm44863-201ENSMUST00000207613 1422 ntBASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Gm12895-201ENSMUST00000122214 226 ntBASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhb17Q91VD8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhb17Q91VD8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhb17Q91VD8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhb17Q91VD8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhb17Q91VD8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb17Q91VD8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb17Q91VD8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb17Q91VD8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdhb17Q91VD8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.64■□□□□ 0.25
Pcdhb17Q91VD8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdhb17Q91VD8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdhb17Q91VD8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb17Q91VD8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb17Q91VD8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb17Q91VD8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb17Q91VD8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb17Q91VD8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Gm28975-201ENSMUST00000186412 686 ntBASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Gm36982-201ENSMUST00000193796 1128 ntBASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb17Q91VD8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb17Q91VD8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms