Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Gm8655-201ENSMUST00000221159 852 ntBASIC15.8■□□□□ 0.12
Vsx1Q91V10 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.79■□□□□ 0.12
Vsx1Q91V10 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.79■□□□□ 0.12
Vsx1Q91V10 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Gm27321-201ENSMUST00000185021 205 ntBASIC15.79■□□□□ 0.12
Vsx1Q91V10 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Vsx1Q91V10 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.79■□□□□ 0.12
Vsx1Q91V10 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.78■□□□□ 0.12
Vsx1Q91V10 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vsx1Q91V10 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vsx1Q91V10 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vsx1Q91V10 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vsx1Q91V10 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vsx1Q91V10 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.77■□□□□ 0.12
Vsx1Q91V10 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vsx1Q91V10 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vsx1Q91V10 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vsx1Q91V10 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vsx1Q91V10 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Vsx1Q91V10 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.77■□□□□ 0.12
Vsx1Q91V10 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.77■□□□□ 0.12
Vsx1Q91V10 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vsx1Q91V10 Gm44872-201ENSMUST00000207864 420 ntBASIC15.77■□□□□ 0.12
Vsx1Q91V10 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.77■□□□□ 0.12
Vsx1Q91V10 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.77■□□□□ 0.12
Vsx1Q91V10 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vsx1Q91V10 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vsx1Q91V10 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vsx1Q91V10 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vsx1Q91V10 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vsx1Q91V10 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.77■□□□□ 0.11
Vsx1Q91V10 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vsx1Q91V10 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
Vsx1Q91V10 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vsx1Q91V10 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Vsx1Q91V10 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Vsx1Q91V10 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vsx1Q91V10 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Vsx1Q91V10 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vsx1Q91V10 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.76■□□□□ 0.11
Vsx1Q91V10 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vsx1Q91V10 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.76■□□□□ 0.11
Vsx1Q91V10 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.76■□□□□ 0.11
Vsx1Q91V10 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms