Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.82□□□□□ -0.2
Tram1Q91V04 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tram1Q91V04 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.81□□□□□ -0.2
Tram1Q91V04 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tram1Q91V04 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tram1Q91V04 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.81□□□□□ -0.2
Tram1Q91V04 Gm18666-201ENSMUST00000190039 958 ntBASIC13.81□□□□□ -0.2
Tram1Q91V04 Gm42569-201ENSMUST00000200539 472 ntBASIC13.81□□□□□ -0.2
Tram1Q91V04 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.81□□□□□ -0.2
Tram1Q91V04 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Tram1Q91V04 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Tram1Q91V04 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tram1Q91V04 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Tram1Q91V04 Gm12933-201ENSMUST00000120203 872 ntBASIC13.8□□□□□ -0.2
Tram1Q91V04 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Tram1Q91V04 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Tram1Q91V04 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Tram1Q91V04 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.8□□□□□ -0.2
Tram1Q91V04 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.8□□□□□ -0.2
Tram1Q91V04 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Tram1Q91V04 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Tram1Q91V04 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tram1Q91V04 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.79□□□□□ -0.2
Tram1Q91V04 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.79□□□□□ -0.2
Tram1Q91V04 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.79□□□□□ -0.2
Tram1Q91V04 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.79□□□□□ -0.2
Tram1Q91V04 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.79□□□□□ -0.2
Tram1Q91V04 Gm7638-201ENSMUST00000121348 967 ntBASIC13.79□□□□□ -0.2
Tram1Q91V04 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tram1Q91V04 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tram1Q91V04 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tram1Q91V04 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Tram1Q91V04 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tram1Q91V04 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tram1Q91V04 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tram1Q91V04 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.78□□□□□ -0.2
Tram1Q91V04 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms