Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.22
Pcdhb11Q91UZ8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Mir6404-201ENSMUST00000183699 94 ntBASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb11Q91UZ8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhb11Q91UZ8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Gm18669-201ENSMUST00000216049 778 ntBASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.37■□□□□ 0.21
Pcdhb11Q91UZ8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 Gm44454-201ENSMUST00000198541 138 ntBASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdhb11Q91UZ8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms