Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
StrcQ8VIM6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
StrcQ8VIM6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
StrcQ8VIM6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
StrcQ8VIM6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
StrcQ8VIM6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.97■□□□□ 0.63
StrcQ8VIM6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.97■□□□□ 0.63
StrcQ8VIM6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Gm6973-201ENSMUST00000117080 721 ntBASIC18.97■□□□□ 0.63
StrcQ8VIM6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Mir7684-201ENSMUST00000183858 60 ntBASIC18.97■□□□□ 0.63
StrcQ8VIM6 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.97■□□□□ 0.63
StrcQ8VIM6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
StrcQ8VIM6 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.96■□□□□ 0.63
StrcQ8VIM6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
StrcQ8VIM6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
StrcQ8VIM6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
StrcQ8VIM6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
StrcQ8VIM6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
StrcQ8VIM6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.96■□□□□ 0.63
StrcQ8VIM6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
StrcQ8VIM6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
StrcQ8VIM6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
StrcQ8VIM6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
StrcQ8VIM6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Gm2810-201ENSMUST00000118681 990 ntBASIC18.95■□□□□ 0.62
StrcQ8VIM6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC18.95■□□□□ 0.62
StrcQ8VIM6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
StrcQ8VIM6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
StrcQ8VIM6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Gm7730-201ENSMUST00000212486 454 ntBASIC18.94■□□□□ 0.62
StrcQ8VIM6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
StrcQ8VIM6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Gm6415-201ENSMUST00000118488 348 ntBASIC18.93■□□□□ 0.62
StrcQ8VIM6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Gm27306-201ENSMUST00000183970 107 ntBASIC18.93■□□□□ 0.62
StrcQ8VIM6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.93■□□□□ 0.62
StrcQ8VIM6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
StrcQ8VIM6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms