Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Gm14140-201ENSMUST00000119999 995 ntBASIC16.98■□□□□ 0.31
TraipQ8VIG6 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.98■□□□□ 0.31
TraipQ8VIG6 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.98■□□□□ 0.31
TraipQ8VIG6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TraipQ8VIG6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TraipQ8VIG6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.96■□□□□ 0.31
TraipQ8VIG6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.96■□□□□ 0.31
TraipQ8VIG6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Gm5682-201ENSMUST00000173402 505 ntBASIC16.96■□□□□ 0.31
TraipQ8VIG6 Gm8000-201ENSMUST00000188378 592 ntBASIC16.96■□□□□ 0.31
TraipQ8VIG6 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.96■□□□□ 0.31
TraipQ8VIG6 Gm19164-201ENSMUST00000210667 640 ntBASIC16.96■□□□□ 0.31
TraipQ8VIG6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.96■□□□□ 0.31
TraipQ8VIG6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TraipQ8VIG6 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.96■□□□□ 0.3
TraipQ8VIG6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TraipQ8VIG6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.96■□□□□ 0.3
TraipQ8VIG6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TraipQ8VIG6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TraipQ8VIG6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Gm11779-201ENSMUST00000118541 368 ntBASIC16.95■□□□□ 0.3
TraipQ8VIG6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.95■□□□□ 0.3
TraipQ8VIG6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TraipQ8VIG6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms