Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Gm27622-201ENSMUST00000183779 60 ntBASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cspg4Q8VHY0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cspg4Q8VHY0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.71□□□□□ -0.22
Cspg4Q8VHY0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cspg4Q8VHY0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Cspg4Q8VHY0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Cspg4Q8VHY0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Mir6420-201ENSMUST00000185032 102 ntBASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Gm36967-201ENSMUST00000193814 266 ntBASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Gm17968-201ENSMUST00000194902 784 ntBASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Gm45167-201ENSMUST00000208007 322 ntBASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cspg4Q8VHY0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Gm43630-201ENSMUST00000201550 776 ntBASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cspg4Q8VHY0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Gm12490-201ENSMUST00000120255 560 ntBASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Gm4899-201ENSMUST00000178708 719 ntBASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Gm5177-201ENSMUST00000183092 997 ntBASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms