Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Mir1199-201ENSMUST00000117015 119 ntBASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Gm11539-201ENSMUST00000119837 557 ntBASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Odf3b-204ENSMUST00000227834 930 ntBASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rab40bQ8VHP8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab40bQ8VHP8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.4□□□□□ -0.1
Rab40bQ8VHP8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Rab40bQ8VHP8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40bQ8VHP8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40bQ8VHP8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40bQ8VHP8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Rab40bQ8VHP8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40bQ8VHP8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40bQ8VHP8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40bQ8VHP8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40bQ8VHP8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40bQ8VHP8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab40bQ8VHP8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms