Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lsm1Q8VC85 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Gm22697-201ENSMUST00000175194 63 ntBASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lsm1Q8VC85 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Gm11355-201ENSMUST00000121120 306 ntBASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lsm1Q8VC85 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.35■□□□□ 0.05
Lsm1Q8VC85 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Gm6433-201ENSMUST00000118634 875 ntBASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Gm44430-201ENSMUST00000203376 995 ntBASIC15.35■□□□□ 0.05
Lsm1Q8VC85 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.35■□□□□ 0.05
Lsm1Q8VC85 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Gm18101-201ENSMUST00000215769 548 ntBASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lsm1Q8VC85 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.35■□□□□ 0.05
Lsm1Q8VC85 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Gm10052-201ENSMUST00000168019 960 ntBASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms