Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 BC037039-201ENSMUST00000192003 2205 ntBASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc9Q8VC31 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.34■□□□□ 0.69
Ccdc9Q8VC31 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc9Q8VC31 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc9Q8VC31 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc9Q8VC31 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc9Q8VC31 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc9Q8VC31 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc9Q8VC31 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc9Q8VC31 Nespas-201ENSMUST00000143738 1083 ntBASIC19.33■□□□□ 0.68
Ccdc9Q8VC31 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Ccdc9Q8VC31 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.33■□□□□ 0.68
Ccdc9Q8VC31 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc9Q8VC31 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc9Q8VC31 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc9Q8VC31 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc9Q8VC31 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc9Q8VC31 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc9Q8VC31 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc9Q8VC31 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc9Q8VC31 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc9Q8VC31 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc9Q8VC31 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Gm27405-201ENSMUST00000184201 112 ntBASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Gm45504-201ENSMUST00000211407 2107 ntBASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc9Q8VC31 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc9Q8VC31 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccdc9Q8VC31 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC19.31■□□□□ 0.68
Ccdc9Q8VC31 Gm16425-201ENSMUST00000118143 3130 ntBASIC19.31■□□□□ 0.68
Ccdc9Q8VC31 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc9Q8VC31 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc9Q8VC31 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc9Q8VC31 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC19.31■□□□□ 0.68
Ccdc9Q8VC31 Gm45003-201ENSMUST00000205875 2158 ntBASIC19.31■□□□□ 0.68
Ccdc9Q8VC31 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc9Q8VC31 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc9Q8VC31 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc9Q8VC31 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc9Q8VC31 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc9Q8VC31 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc9Q8VC31 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc9Q8VC31 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc9Q8VC31 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc9Q8VC31 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc9Q8VC31 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms