Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nup35Q8R4R6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Nup35Q8R4R6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nup35Q8R4R6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nup35Q8R4R6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nup35Q8R4R6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nup35Q8R4R6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nup35Q8R4R6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nup35Q8R4R6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nup35Q8R4R6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Sybu-209ENSMUST00000228639 4113 ntBASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Gm12527-201ENSMUST00000117967 564 ntBASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup35Q8R4R6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup35Q8R4R6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms