Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdt1Q8R4E9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdt1Q8R4E9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Gm2651-201ENSMUST00000203560 838 ntBASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdt1Q8R4E9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdt1Q8R4E9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms