Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp7Q8R1T1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp7Q8R1T1 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.44■□□□□ 0.86
Chmp7Q8R1T1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Chmp7Q8R1T1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Chmp7Q8R1T1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp7Q8R1T1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Chmp7Q8R1T1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC20.44■□□□□ 0.86
Chmp7Q8R1T1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Chmp7Q8R1T1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp7Q8R1T1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp7Q8R1T1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp7Q8R1T1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp7Q8R1T1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp7Q8R1T1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp7Q8R1T1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.43■□□□□ 0.86
Chmp7Q8R1T1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp7Q8R1T1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Chmp7Q8R1T1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp7Q8R1T1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Chmp7Q8R1T1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp7Q8R1T1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp7Q8R1T1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.42■□□□□ 0.86
Chmp7Q8R1T1 Gm25911-201ENSMUST00000157621 56 ntBASIC20.42■□□□□ 0.86
Chmp7Q8R1T1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp7Q8R1T1 Mir8117-201ENSMUST00000184773 107 ntBASIC20.42■□□□□ 0.86
Chmp7Q8R1T1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC20.42■□□□□ 0.86
Chmp7Q8R1T1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC20.42■□□□□ 0.86
Chmp7Q8R1T1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp7Q8R1T1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp7Q8R1T1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Chmp7Q8R1T1 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Gm45167-201ENSMUST00000208007 322 ntBASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp7Q8R1T1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Chmp7Q8R1T1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp7Q8R1T1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp7Q8R1T1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp7Q8R1T1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp7Q8R1T1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.4■□□□□ 0.86
Chmp7Q8R1T1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Chmp7Q8R1T1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.4■□□□□ 0.86
Chmp7Q8R1T1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp7Q8R1T1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp7Q8R1T1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp7Q8R1T1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp7Q8R1T1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp7Q8R1T1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp7Q8R1T1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp7Q8R1T1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chmp7Q8R1T1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chmp7Q8R1T1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chmp7Q8R1T1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.39■□□□□ 0.86
Chmp7Q8R1T1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp7Q8R1T1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp7Q8R1T1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.39■□□□□ 0.85
Chmp7Q8R1T1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Chmp7Q8R1T1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC20.39■□□□□ 0.85
Chmp7Q8R1T1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms