Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nudcd3Q8R1N4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nudcd3Q8R1N4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Nudcd3Q8R1N4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Nudcd3Q8R1N4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nudcd3Q8R1N4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nudcd3Q8R1N4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nudcd3Q8R1N4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms