Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Sf3a1Q8K4Z5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sf3a1Q8K4Z5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Sf3a1Q8K4Z5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sf3a1Q8K4Z5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 Mir6404-201ENSMUST00000183699 94 ntBASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Sf3a1Q8K4Z5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a1Q8K4Z5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a1Q8K4Z5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a1Q8K4Z5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a1Q8K4Z5 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.57■□□□□ 0.72
Sf3a1Q8K4Z5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a1Q8K4Z5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.57■□□□□ 0.72
Sf3a1Q8K4Z5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a1Q8K4Z5 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a1Q8K4Z5 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.57■□□□□ 0.72
Sf3a1Q8K4Z5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.57■□□□□ 0.72
Sf3a1Q8K4Z5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a1Q8K4Z5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Sf3a1Q8K4Z5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a1Q8K4Z5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sf3a1Q8K4Z5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3a1Q8K4Z5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3a1Q8K4Z5 Gm15165-201ENSMUST00000118140 502 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms