Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Gm10253-201ENSMUST00000194270 940 ntBASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 AC127302.2-201ENSMUST00000215212 268 ntBASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx54Q8K4L0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx54Q8K4L0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx54Q8K4L0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx54Q8K4L0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx54Q8K4L0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx54Q8K4L0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Ddx54Q8K4L0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx54Q8K4L0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx54Q8K4L0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx54Q8K4L0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx54Q8K4L0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ddx54Q8K4L0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ddx54Q8K4L0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Ddx54Q8K4L0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC20.89■□□□□ 0.93
Ddx54Q8K4L0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx54Q8K4L0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx54Q8K4L0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Gm6018-201ENSMUST00000216090 1306 ntBASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Gm24158-201ENSMUST00000175263 71 ntBASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.88■□□□□ 0.93
Ddx54Q8K4L0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Gm2423-201ENSMUST00000074863 733 ntBASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx54Q8K4L0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx54Q8K4L0 Nudt18-203ENSMUST00000228768 1578 ntBASIC20.86■□□□□ 0.93
Ddx54Q8K4L0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx54Q8K4L0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC20.86■□□□□ 0.93
Ddx54Q8K4L0 Rpph1-201ENSMUST00000175096 319 ntBASIC20.86■□□□□ 0.93
Ddx54Q8K4L0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC20.86■□□□□ 0.93
Ddx54Q8K4L0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC20.86■□□□□ 0.93
Ddx54Q8K4L0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx54Q8K4L0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx54Q8K4L0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx54Q8K4L0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx54Q8K4L0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx54Q8K4L0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm22065-201ENSMUST00000103753 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm22066-201ENSMUST00000103761 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm24932-201ENSMUST00000103763 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm24115-201ENSMUST00000103799 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm22190-201ENSMUST00000103827 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm22191-201ENSMUST00000103831 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm24721-201ENSMUST00000103849 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm28018-201ENSMUST00000103869 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm26399-201ENSMUST00000103937 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms