Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trnt1Q8K1J6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnt1Q8K1J6 Gm15794-201ENSMUST00000120182 631 ntBASIC15.53■□□□□ 0.08
Trnt1Q8K1J6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trnt1Q8K1J6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.53■□□□□ 0.08
Trnt1Q8K1J6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trnt1Q8K1J6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnt1Q8K1J6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnt1Q8K1J6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnt1Q8K1J6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnt1Q8K1J6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trnt1Q8K1J6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trnt1Q8K1J6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trnt1Q8K1J6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trnt1Q8K1J6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.52■□□□□ 0.07
Trnt1Q8K1J6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trnt1Q8K1J6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trnt1Q8K1J6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trnt1Q8K1J6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnt1Q8K1J6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnt1Q8K1J6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Mir6404-201ENSMUST00000183699 94 ntBASIC15.49■□□□□ 0.07
Trnt1Q8K1J6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms