Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgcs1Q8JZK9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcs1Q8JZK9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.3■□□□□ 0.04
Hmgcs1Q8JZK9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.29■□□□□ 0.04
Hmgcs1Q8JZK9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms